The complete sequence of a human genome
1.1k 105
A single molecule sequence assembler for genomes large and small.
C++ 707 181
Interactively explore metagenomes and more from a web browser.
JavaScript 503 109
Fast genome and metagenome distance estimation using MinHash
C++ 456 97
Telomere-to-telomere assembly of accurate long reads (PacBio HiFi, Oxford Nanopore Duplex, HERRO corrected Oxford Nanopore Simplex) and Oxford Nanopore ultra-long reads.
Python 422 34
k-mer based assembly evaluation
Shell 357 25
Extracting paths from assembly graphs
Visualization tool for (meta)genome assembly graphs
Post-verkko graph and assembly curation in Python.
A complete diploid human genome
Interactive ModDotPlot on the web browser
The personalized diploid genome of KOLF iPSC cell line
A collection of miscellaneous code used by Meryl, Canu and others.
Python package for comparing genome assemblies and read data to the diploid Q100 benchmark