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@GMPavanLab

GMPavanLab

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  1. SwarmCGM SwarmCGM Public

    Optimization tool for calibrating coarse-grained force fields of lipids, relying on the simultaneous usage of reference AA trajectories (bottom-up) and experimental data (top-down)

    Python 10

  2. Swarm-CG Swarm-CG Public

    Swarm-CG: Automatic Parametrization of Bonded Terms in MARTINI-based Coarse-Grained Models of Simple to Complex Molecules via Fuzzy Self-Tuning Particle Swarm Optimization

    Python 49 13

  3. gmplabtools gmplabtools Public

    Fortran 1 1

  4. cpctools cpctools Public

    System analysis with soap fingerprints

    Python 4 6

  5. dynsight dynsight Public

    A framework for the analysis of the dynamics of particle trajectories

    Python 11 11

Repositories

Showing 10 of 45 repositories
  • Micro-Information_Analysis Public

    Provisional material for the preprint "Learning the infotmation contained in the microstructure of data distribution".

    GMPavanLab/Micro-Information_Analysis's past year of commit activity
    Python 0 0 0 0 Updated Oct 14, 2026
  • dynsight Public

    A framework for the analysis of the dynamics of particle trajectories

    GMPavanLab/dynsight's past year of commit activity
    Python 11 MIT 11 8 2 Updated Sep 3, 2026
  • Information-Learning-in-TiDeS Public
    GMPavanLab/Information-Learning-in-TiDeS's past year of commit activity
    Python 0 MIT 0 0 0 Updated Jul 6, 2026
  • onion_clustering Public Forked from matteobecchi/onion_clustering

    Code for unsupervised clustering of time-correlated data.

    GMPavanLab/onion_clustering's past year of commit activity
    Python 0 MIT 2 0 0 Updated Jan 20, 2026
  • Molecular-Motor-Fibres Public
    GMPavanLab/Molecular-Motor-Fibres's past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 25, 2025
  • DefectsTracker_METALS Public
    GMPavanLab/DefectsTracker_METALS's past year of commit activity
    Python 0 1 0 0 Updated May 28, 2025
  • DisNuc Public
    GMPavanLab/DisNuc's past year of commit activity
    Python 1 0 0 0 Updated Apr 27, 2025
  • MultiSPbind Public
    GMPavanLab/MultiSPbind's past year of commit activity
    MATLAB 0 0 0 0 Updated Mar 18, 2025
  • Optimal-Spatiotemporal-Resolutions Public

    It contains all the code used for: "Optimal Spatiotemporal Resolutions"

    GMPavanLab/Optimal-Spatiotemporal-Resolutions's past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Jan 10, 2025
  • Descriptors Public

    It contains all the code used for: "A data-driven approach to classify descriptors based on their efficiency in translating noisy trajectories into physically-relevant information"

    GMPavanLab/Descriptors's past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Dec 12, 2024
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