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Upgrade Pyrefly to 1.4.0 #2156

Job	Run time
build (3.14, ubuntu-latest, pre-commit)	44s
build (3.14, ubuntu-latest, manual)	45s
build (3.14, windows-latest, manual)	2m 7s
build (3.14, windows-latest, pre-commit)	2m 25s
build (3.14, ubuntu-latest, pre-push)	41s
build (3.14, windows-latest, pre-push)	2m 26s
completion-lint	2s
	9m 10s